R RGE Toolkit
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  • Variant-aware Cas-OFFinder
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Find the best CRISPR tools
for your next discovery.

Guide RNA design, variant-aware off-target search, and editing-outcome analysis — one connected workflow, no account required.

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Guide RNA design Design & ranking Off-target search 52 PAM presets Variant-aware search VCF & haplotypes Editing outcomes NGS analysis Genome database 800+ assemblies Guides & support Docs, FAQ, contact

Featured tools

CD Cas-Designer Guide RNA design

Find and rank candidate gRNAs in a target sequence — GC content, out-of-frame score and off-target counts side by side.

Free Open tool
CO Cas-OFFinder Off-target search

Search a reference genome for potential off-target sites across 52 PAM types, with mismatch and DNA/RNA bulge tolerance.

Free Open tool
VC Variant-aware Cas-OFFinder Off-target search · VCF

Haplotype-aware off-target search that folds an individual’s variants from a VCF into the reference before matching.

Free Open tool
CA Cas-Analyzer Editing outcome analysis

Quantify indel frequencies and editing efficiency at a target site directly from paired-end NGS reads.

Free Open tool
DB Cas-Database Reference data

Browse precomputed guide RNA and off-target sets across the supported genome assemblies.

Free Open tool
5 Tools
52 PAM presets
800+ Genomes
Free No account

designed & developed by:

Computational Omics Laboratory at Pusan National University

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